Perfect for advanced undergraduate, graduate and medical students, genetic counselors, residents, fellows, clinicians and researchers.
In-Person Capacity: 100 | Virtual Option Available
Please contact the event organizer for more information
Jul 17 - 28
2023
Offered annually for over 60 years, the ‘Short Course’ is a 2-week program consisting of an immersive set of lectures, workshops, tutorials and demonstrations to understand the breadth of modern human genetics. The faculty includes leaders in contemporary genetics and genomics from Johns Hopkins, The Jackson Laboratory and other institutions around the world. The course covers basic science, clinical and translational aspects of human genetics and genomics, and runs the gamut from gene and variant discovery in Mendelian and complex disease, genome biology, the molecular basis of genetic disease, the use of animal models of human disease to understand pathophysiology, as well as genetic disease treatment and therapy. Workshops and lectures also cover bioinformatics, population genetics, genome manipulation, mutagenesis and phenotyping.
Alondra Nelson, Ph.D., Institute for Advanced Study
Eric Olson, Ph.D., University of Texas Southwestern Medical Center
Jonathan Pritchard, Ph.D., Stanford University
Peter Byers, M.D., University of Washington School of Medicine
The in-person course includes daily lectures from 8:00 AM - 12:30 PM, afternoon workshops and special sessions from 2:00 - 4:00 PM, and featured evening lectures from 7:00 - 8:30 PM. In addition there will be a mouse genetics clinic where you'll have a chance to see unique mouse models developed at The Jackson Laboratory, a human genetics clinic and ample networking opportunities such as a poster session, lunches with course faculty, and special receptions. The faculty is diverse in terms of disciplines and the students in terms of stage of career and fields of concentration. This diversity makes for an enriching experience for all. Although the course schedule is quite full, there is time set aside to enjoy the natural beauty of Mt. Desert Island and Acadia National Park.
The virtual audience will have access to the live-stream for morning lectures from (approximately) 8:00 AM - 12:30 PM EDT and will have the ability to ask questions at the end of each lecture through a virtual Q+A function. In addition, all lectures will be recorded and posted within 72 hours of airing on a centralized Canvas course that participants will have access to for six months following the course.
The virtual audience will not have access to live or recorded versions of workshops or special evening sessions.
View the virtual schedule here.
The Jackson Laboratory (JAX) Courses and Conferences program is committed to:
(1) Fostering an educational and working environment that encourages and supports our mission and the promotion of free and open exchange of scientific ideas;
(2) Creating and maintaining a safe and respectful environment for all in-person and virtual participants in educational programs, including event directors and organizers, internal and invited speakers, attendees, and all staff; and
(3) Providing an environment free from discrimination and harassment, in accordance with federal, state and local law, at all of our courses, conferences, symposia and workshops delivered both on and off of the JAX campuses.
The Code and expectations outlined below are aligned with the JAX Code of Conduct and NIH Policy and are applicable to all intramural and extramural participants including faculty, trainees, students and staff.
By registering for and attending a JAX Courses and Conferences -facilitated meeting or event, either in person or virtually, participants agree to:
By participating in JAX Courses and Conferences programming attendees, either in person or virtually, agree to refrain from:
What to do in case of breaches or violations of these guidelines:
Program organizers and leadership can be approached informally about any apparent or actual breaches or violations. Breaches or violations should be reported to the specific program leader or to JAX Courses and Conferences organizers in person or by email:
Reports can be submitted by those who experience harassment or discrimination as well as by those who witness violations of the behavior laid out in this Code. The TDCC will act as needed to resolve the matter, up to and including immediate expulsion of the offending participant(s) from the meeting and exclusion from future events offered by JAX. Individuals at any NIH-supported conference who have questions, concerns or complaints related to harassment or discrimination can also file a report with the HHS Office for Civil Rights (OCR) or notify NIH. Seeking assistance from a program leader or organizer in no way prohibits filing complaints with HHS OCR.
9:30 AM |
Monday, July 17th 8:00 – 9:30 AM General Registration
9:30 - 9:45 AM Course Announcements & General Housekeeping
9:45 – 10:00 AM Welcome & Opening Remarks Lon Cardon, Ph.D., FMedSci, The Jackson Laboratory
10:00 – 11:00 AM History of Human Genetics David Valle, M.D., Johns Hopkins University School of Medicine
11:00 AM – 12:00 PM Mice as Models for Human Diseases Greg Cox, Ph.D., The Jackson Laboratory
1:30 – 2:30 PM Opportunities and Limits in the 21st Century Mouse Model System Steven Munger, Ph.D., The Jackson Laboratory
2:30 – 3:30 PM Genetic Recombination & Mutation Beth Dumont, Ph.D., The Jackson Laboratory
3:45 – 4:45 PM Nuclear Genome Organization: Chromosome Structure and Regulation Jeanne Lawrence, Ph.D., University of Massachusetts Medical School
4:45 - 5:00 PM Introduction & Welcome - Thomas H. Roderick Memorial Lecture
5:00 – 6:30 PM Thomas H. Roderick Lecture – The Jackson Laboratory Auditorium Gene Regulation, Selection, and the Genetic Architecture of Complex Traits Jonathan Pritchard, Ph.D., Stanford University
7:00 PM Thomas H. Roderick Memorial Lecture Reception and Dinner |
9:00 AM |
Tuesday, July 18th 8:00 – 9:00 AM The Utility of Gapless Genome Assemblies in Understanding Biology Rachel O’Neill, Ph.D., Institute for Systems Genomics, University of Connecticut
9:00 – 10:00 AM Transcriptional Regulation of Gene Expression Andrew McCallion, Ph.D., Johns Hopkins University School of Medicine
10:30 – 11:30 AM Single Cell Analysis in Development and Disease Loyal Goff, Ph.D., Johns Hopkins University School of Medicine
11:30 AM – 12:30 PM A Decade of Technology-Drive Insights Into the 3D Genome's Structure-Function Relationship Jennifer Phillips-Cremins, Ph.D., University of Pennsylvania
2:00 – 2:30 PM WORKSHOP: Intro to MGI
2:30 – 3:00 PM WORKSHOP: Intro to OMIM
3:00 – 4:30 PM WORKSHOP: All of US Genevieve Brandt, M.S, Broad Institute of MIT & Harvard* *Presenting Remotely
7:00 – 8:30 PM Nature and Consequences of Genomic Variants – College of the Atlantic, College of Human Ecology (CHE) Building Stylianos Antonarakis, M.D., DSc, University of Geneva Medical School
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8:00 AM |
Wednesday, July 19th 8:00 – 9:00 AM Advancing Genomic Technologies for Insights into Genome Organization and Transcription Chia Lin Wei, Ph.D., The Jackson Laboratory for Genomic Medicine
9:00 – 10:00 AM gnomAD: Human Genome Variation & its Properties Anne O’Donnell-Luria, M.D., Ph.D., Broad Institute of MIT & Harvard
10:30 – 11:30 AM TBD Steven Scherer, Ph.D., University of Toronto
11:30 AM – 12:30 PM Inborn Errors of the Epigenetic Apparatus: Genetics of Chromatin Readers & Writers Hans Bjornsson, M.D., Ph.D., Johns Hopkins University School of Medicine, University of Iceland
2:00 – 4:00 PM WORKSHOP: The UCSC Genome Browser - Gateway to Genomic Data Robert Kuhn, Ph.D., University of California Santa Cruz- retired
7:00 – 8:30 PM Senior Lecturer – College of the Atlantic, CHE Building Medicine, a Subspecialty of Genetics Peter Byers, M.D., UW Medicine |
8:00 AM |
Thursday, July 20th 8:00 – 9:00 AM Machine Learning for Regulatory Genomics: Basics and Pitfalls Michael Beer, Ph.D., Johns Hopkins University
9:00 – 10:00 AM Probing Molecular Phenotypes with Quantitative Proteomics Devin Schweppe, Ph.D., University of Washington
10:30 – 11:30 AM TBD Gary Churchill, Ph.D., The Jackson Laboratory
11:30 AM – 12:30 PM Model Organism Genetics and Human Disease: Models and Mechanisms to Therapies Phil Hieter, Ph.D., University of British Columbia
2:00 – 4:00 PM WORKSHOP: RNA Sequencing Steven Munger, Ph.D., The Jackson Laboratory
4:00 – 5:30 PM Poster Session
7:00 – 8:30 PM Genetics and Genomics of Oxygen Homeostasis – College of the Atlantic, CHE Building Gregg Semenza, M.D., Ph.D., Johns Hopkins University |
8:00 AM |
Friday July 21st 8:00 – 9:00 AM Systems Biology of the Cell Aravinda Chakravarti, Ph.D., NYU Langone Health
9:00 – 10:00 AM Inherited Susceptibility to Cancer William Foulkes, Ph.D., McGill University
10:30 – 11:30 AM Using the Full Potential of Whole-Genome Sequencing in Cancer Genomics Serena Nik-Zainal, Ph.D., University of Cambridge *Presenting Remotely
11:30 AM – 12:30 PM Cancer Biology Exposed Through Large-Scale Sequencing
2:00 – 4:00 PM WORKSHOP: ClinGen, ClinVar and other Genomic Curation Databases Heidi Rehm, Ph.D., Massachusetts General Hospital & The Broad Institute
4:15 – 5:45 PM Chen K. Chai Memorial Lecture – The Jackson Laboratory Auditorium Tech Policy for Geneticists Alondra Nelson, Ph.D., Institute for Advanced Study
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8:00 AM |
Monday, July 24th 8:00 – 9:00 AM Genetic and Genomic Analysis of Complex Traits and Diseases Benjamin Neale, Ph.D., The Broad Institute and Massachusetts General Hospital
9:00 – 10:00 AM Human Evolution and Adaptation in Africa Sarah Tishkoff, Ph.D., University of Pennsylvania, Perelman School of Medicine
10:30 – 11:30 AM Harnessing our Common African Genome to Improve Health Globally Ambroise Wonkam, M.D., Ph.D., Johns Hopkins University
11:30 AM – 12:00 PM Post-traumatic Transgenerational Epigenetic Changes in Rwanda Leon Mutesa, M.D., Ph.D., University of Rwanda
12:00 – 12:30 PM Complex Diseases Gene Mapping and Risk Prediction for African Populations
2:00 – 4:00 PM WORKSHOP: WES/WGS Analysis Nara Sobreira, M.D., Ph.D., Johns Hopkins University
7:00 – 8:30 PM Victor A. McKusick Memorial Lecture – College of the Atlantic, CHE Building Eric Olson, Ph.D., UT Southwestern Medical Center |
8:00 AM |
Tuesday, July 25th 8:00 – 9:00 AM Genetics of Infectious Diseases Steven Holland, M.D., National Institute of Allergy & Infectious Diseases, NIH
9:00 – 10:00 AM Genomics Characterization and Surveillance of Microbial Threats in West Africa Christian Happi, Ph.D., Redeemer’s University
10:30 – 11:30 AM Inherited Defects of Adaptive Immunity: Advances in Diagnosis and Treatment Jennifer Puck, Ph.D., University of California San Francisco *Presenting Remotely
11:30 AM – 12:30 PM The Human Genetic and Immunological Determinants of Life-Threatening COVID-19 Jean-Laurent Casanova, M.D, Ph.D., The Rockefeller University *Presenting Remotely
12:30 – 2:00 PM Trainee Lunch Alice Matimba on International Outreach
2:00 – 4:00 PM WORKSHOP: Mouse Genomics informatics Carol Bult, Ph.D., The Jackson Laboratory
7:00 – 8:30 PM Engineering T cells in vivo with mRNA – College of the Atlantic, CHE Building Jonathan Epstein, M.D., University of Pennsylvania
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8:00 AM |
Wednesday, July 26th 8:00 – 9:00 AM Prenatal Screening Diagnosis & Therapy Ignatia Van den Veyver, M.D., Baylor College of Medicine
9:00 – 10:00 AM MyCode: Enabling Genomic Discoveries and Moving Genomics into Everyday Care Juliann Savatt, M.S., C.G.C., Geisinger
10:30 – 11:30 AM Ethics and Policy Issues Raised by Genetics and Genomics Debra Mathews, Ph.D., MA, Johns Hopkins University
11:30 AM – 12:30 PM GENOMICS FOR EVERYONE? AN INDIGENOUS PERSPECTIVE Krystal Tsosie, Ph.D., Arizona State University
2:00 – 3:00 PM Human Genetics Clinic
3:00 – 4:00 PM Human Genetics Clinic Presentations
7:00 – 8:30 PM Panel: Using Population Descriptors in Genetics & Genomics Research – College of the Atlantic, Gates Auditorium Aravinda Chakravarti, Ph.D., NYU Langone Health Debra Mathews, Ph.D., MA, Johns Hopkins University Sarah Tishkoff, Ph.D., University of Pennsylvania, Perelman School of Medicine |
8:00 AM |
Thursday, July 27th 8:00 – 9:00 AM Inborn Errors of Metabolism: A Primer Hilary Vernon, M.D., Ph.D., Johns Hopkins University
9:00 – 10:00 AM Metabolomics and Human Diseases Ralph DeBerardinis, M.D., Ph.D., University of Texas, Southwestern
10:30 – 11:30 AM Pharmacogenomics to Pharmaco-omics, AI and ML Richard Weinshilboum, M.D., Mayo Clinic
11:30 AM – 12:30 PM Integrating Molecular Genetics Testing into Mainstream Medicine: View from a Commercial Laboratory
12:30 - 1:00 PM The Jackson Laboratory Rare Disease Translation Center Cat Lutz, Ph.D., M.B.A., The Jackson Laboratory
1:00 – 3:00 PM Skippy Lane Memorial Mouse Clinic Greg Cox, Ph.D., The Jackson Laboratory
7:00 – 8:30 PM ELSI Case Studies – College of the Atlantic, Gates Auditorium John A. Phillips, III., M.D., Vanderbilt University School of Medicine Ada Hamosh, M.D., Johns Hopkins University School of Medicine Debra Mathews, Ph.D., MA, Johns Hopkins University |
8:00 AM |
Friday, July 28th 8:00 – 9:00 AM Gene Therapy Approaches to Hemoglobinopathies Stuart Orkin, M.D., Harvard Medical School
9:00 – 10:00 AM Early Forays in Individualized Genetic Medicine Timothy Yu, M.D., Ph.D., Harvard Medical School & Boston Children’s Hospital
10:30 – 11:30 AM Precision Genome Editing Tools to Address Genetic Disease Greg Newby, Ph.D., Broad Institute of MIT & Harvard
11:30 AM – 12:30 PM Genetic & Pharmacologic Modifiers of Cystic Fibrosis Garry Cutting, M.D., Johns Hopkins University
2:30 – 3:30 PM Insights into the Pathogenesis and Treatment of Vascular Connective Tissue Disorders Harry ‘Hal’ Dietz, M.D., Johns Hopkins University
3:30 – 4:30 PM Course Summary and Wrap-Up |
Professor and Chairman of Genetic Medicine
Bioinformatics Analyst III
Professor of Biomedical Engineering
Assistant Professor of Pediatrics and Genetics; Associate Professor
Professor, Knowlton Family Chair
President and CEO
Levi Family Professor
Professor, Karl Gunnar Johansson Chair
Professor of Genetic Medicine
Chief, Division of Pediatric Genetics and Metabolism; Professor
Director, William S. Smilow Center for Marfan Syndrome Research Institute of Genetic Medicine; Professor of Genetic Medicine
Associate Professor
Professor of Medicine and Cell and Developmental Biology & Executive Vice Dean and Chief Scientific Officer; Senior Vice President and Chief Scientific Officer
Assistant Professor, Genetic Medicine
Professor
Professor
Director, Division of Intramural Research; Chief Immunopathogenesis Section
Associate Director, UCSC Genome Browser
Professor of Neurology and Pediatrics
Associate Professor, Genetic Medicine
Assistant Director, Human Genetics Graduate Program; Professor of Genetic Medicine
Associate Professor
Professor
Institute Member and Co-Director of Program in Medical and Population Genetics; Associate Professor
Harold F. Linder Professor, Distinguished Senior Fellow
Postdoctoral Fellow
Professor of Genomic Medicine and Bioinformatics
Chief Medical Officer
Assistant Professor & Co-Director of the Center of Mendelian Genomics
Professor
Professor of Pediatrics
Professor of Pediatrics and Director, Division of Medical Genetics
Associate Professor
Professor of Population Studies
Professor of Pediatrics
Chief Genomics Officer
Assistant Professor of Genome Sciences
Professor of Genetic Medicine
Assistant Professor of Genetic Medicine
Professor
Professor
Professor of Oncology, Pathology and Medicine; Co-Director of Cancer Genetics and Epigenetics; Associate Cancer Center Director for Precision Medicine
Associate Professor of Medical Genetics
Professor of Pharmacology and Medicine
Director, McKusick-Nathans Institute, and Department of Genetic Medicine, Professor of Genetic Medicine; Professor of Medical Genetics, Director of GeneMAP
Associate Professor in Pediatrics; Attending Physician
Standard Registration Fee: $400; Scholarship Applicant Registration Fee: $25
Participants are responsible for arranging their lodging off-campus.
Subsidized, dormitory-style, shared lodging will be made available to approximately sixty attendees on a first-come, first-serve basis at College of the Atlantic.
We will be providing shuttles from the College of the Atlantic to the Jackson Laboratory and back for the duration of the course.
Air
Bar Harbor is serviced by two airports:
Hancock County/Bar Harbor Airport (BHB) – 20 minutes away
Bangor International Airport (BGR) – 1hr 15 minutes away
Public transportation is not available from local airports. Please visit the Bar Harbor and Bangor airport services webpages for information on shuttles to and from Mount Desert Island. Rideshare options like Uber or Lyft are not commonly available.
Ground
Bar Harbor is approximately 5 hours by car from the greater Boston area. Rental cars are available from Hertz at either nearby airport. Additionally, there is a free Island Explorer bus system which can be used around the island and the national park.
Additional Area Information:
Bar Harbor Chamber of Commerce
Acadia National Park
Director, Center for Human Genetics and Genomics
Dr. Frank V. Sutland Professor of Pediatric Genetics; Professor of Genetic Medicine
Professor, The Robert Alvine Family Endowed Chair
Scientific Director and Professor, The Jackson Laboratory for Mammalian Genetics, the Maxine Groffsky Endowed Chair
Professor of Genetic Medicine and Director, Institute of Genetic Medicine
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